宋寶興

　　 　　

一、基本信息

宋寶興，男，1987年9月出生于山東德州。植物學(xué)專業(yè)博士，西北農(nóng)林科技大學(xué)教授、博士生導(dǎo)師。入選國家高層次人才青年項(xiàng)目。國際玉米遺傳協(xié)會(huì)會(huì)員、中國生物工程學(xué)會(huì)計(jì)算生物學(xué)與生物信息學(xué)專業(yè)委員會(huì)委員、Sigma Xi 科學(xué)研究協(xié)會(huì)會(huì)員。《BMC Genomics》雜志編委、《New Crops》雜志編委、《Beverage Plant Research》期刊青年編委、《iMeta》期刊青年編委。擔(dān)任《Nature Plants》、《Genome Research》、《Bioinformatics》等雜志審稿人。

二、學(xué)習(xí)工作經(jīng)歷

2023-今  西北農(nóng)林科技大學(xué) 教授，博士生導(dǎo)師

2018-2022  美國康奈爾大學(xué)博士后

2014-2018  德國馬克斯·普朗克植物育種研究所博士

2010-2013  西北農(nóng)林科技大學(xué)碩士

2006-2010  鄭州大學(xué)學(xué)士

三、研究方向

致力于通過玉米和禾本科植物的遺傳研究，實(shí)現(xiàn)高效、環(huán)境友好、并可持續(xù)的農(nóng)業(yè)發(fā)展模式。通過開發(fā)并應(yīng)用前沿的分子進(jìn)化和群體遺傳學(xué)理論，挖掘長期進(jìn)化過程中的關(guān)鍵農(nóng)業(yè)性狀和環(huán)境適應(yīng)性的主效基因并解析其分子機(jī)制并應(yīng)用于分子設(shè)計(jì)育種。

課題組致力于培養(yǎng)善于獨(dú)立思考、勇于探索、具有領(lǐng)導(dǎo)力的青年科學(xué)家。歡迎生命科學(xué)、數(shù)學(xué)或計(jì)算機(jī)科學(xué)相關(guān)背景的學(xué)生報(bào)考。鼓勵(lì)有意向攻讀碩士或博士研究生學(xué)位的同學(xué)提前以實(shí)習(xí)生或科研助理的身份加入實(shí)驗(yàn)室進(jìn)行深入了解，優(yōu)先接收在本實(shí)驗(yàn)室實(shí)習(xí)過的候選人。

四、科研成果

1、代表性論文（#，equal contribution; *，corresponding）

（1）Baoxing Song*, Edward S. Buckler, Michelle C. Stitzer*. New whole-genome alignment tools are need for tapping plant diversity. Trends in Plant Science. 2023

（2）Baoxing Song*, Santiago Marco-Sola, Miquel Moreto, Lynn Johnson, Edward S. Buckler*, Michelle C. Stitzer*. AnchorWave: Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism, and whole-genome duplication. PNAS. 2022

（3）Baoxing Song*, Edward S. Buckler, Hai Wang, Yaoyao Wu, Evan Rees, Elizabeth A. Kellogg, Daniel J. Gates, Merritt Khaipho-Burch, Peter J. Bradbury, Jeffrey Ross-Ibarra, Matthew B. Hufford and M. Cinta Romay*. Conserved noncoding sequences provide insights into regulatory sequence and loss of gene expression in maize. Genome Research. 2021

（4）Baoxing Song, Richard Mott, Xiangchao Gan*. Recovery of novel association loci in Arabidopsis thaliana and Drosophila melanogaster through leveraging INDELs association and integrated burden test. PLoS Genetics. 2018

（5）Guang Yang#, Yan Pan#, Wenqiu Pan#, Qingting Song, Ruoyu Zhang, Wei Tong, Licao Cui, Wanquan Ji, Weining Song, Baoxing Song*, Pingchuan Deng*, Xiaojun Nie*. Combined GWAS and eGWAS reveals the genetic basis underlying drought tolerance in emmer wheat (Triticum turgidum L.). New Phytologist. 2024

（6）Baoxing Song^*#, Qing Sang^#, Hai Wang, Huimin Pei, XiangChao Gan* and Fen Wang*. Complement Genome Annotation Lift Over Using a Weighted Sequence Alignment Strategy. Frontiers in Genetics. 2019

（7）Fen Wang^*#, Baohui Zhang^#, Di Wen^#, Rong Liu, Xinzhuan Yao, Zhi Chen, Ren Mu, Huimin Pei, Min Liu, Baoxing Song* and Litang Lu*. Chromosome-scale genome assembly of Camellia sinensis combined with multi-omics provides insights into its responses to infestation with green leafhoppers. Frontiers in Plant Science. 2022

（8）Fen Wang, Zhi Chen, Huimin Pei, Zhiyou Guo, Di Wen, Rong Liu, Baoxing Song*. Transcriptome profiling analysis of tea plant (Camellia sinensis) using Oxford Nanopore long-read RNA-Seq technology. Gene. 2021

（9）Fen Wang^#, Baoxing Song^#, Xing Zhao, Yaotian Miao, Dengyun Li, Na Zhou, Pengfei Jiang, Qing Sang, Jingfei Huang, Deli Zhang*. Prediction and analysis of the protein-protein interaction networks for chickens, cattle, dogs, horses and rabbits. Current bioinformatics. 2016

（10）Baoxing Song^#, Fen Wang^#, Yang Guo, Qing Sang, Min Liu, Dengyun Li, Wei Fang, Deli Zhang. Protein–protein interaction network‐based detection of functionally similar proteins within species. Proteins: Structure, Function, and Bioinformatics. 2012

（11）Baoxing Song, Xiaoquan Su, Jian Xu, Kang Ning*. MetaSee: an interactive and extendable visualization toolbox for metagenomic sample analysis and comparison. PLoS One. 2012

2、軟件著作權(quán)

(1) 宋寶興; GEnomic sequence and genome structure ANnotation liftover, 2020SR0584132

(2) 宋寶興 ; AnchorWave軟件1.2.2, 2024SR0297907

3、大會(huì)報(bào)告

（1）Baoxing Song; AnchorWave: sensitive alignment of genomes with high diversity, structural polymorphism and whole-genome duplication variation, 2022 Maize Genetics Meeting, 美國圣路易斯

（2）Baoxing Song; Santiago Marco-Sola; Miquel Moreto; Lynn Johnson; Edward S. Buckler; Michelle C. Stitzer ; AnchorWave: sensitive alignment of genomes with high diversity, structural polymorphism and whole-genome duplication, Biodiversity Genomics 2022, 美國加州戴維斯

五、聯(lián)系方式

通訊地址：陜西楊凌邰城路3號(hào)西北農(nóng)林科技大學(xué)農(nóng)學(xué)院

郵編：    712100

E-mail：  songbaoxing168@163.com